1-2MBps is about what you should expect, even on 100Mbps card. 1Mb is usual with tytools. If you tivo is not recording putting it in standby might make it go to 2Mbps. (From personal experience using ms_ftp and the .tmf format).
ms_ftp is quite flacky, make sure passive is disabled on your client and also make sure only 1 connection/thread to the tivo is used. Basically make your ftp client as dumb as possible.
I've only had that when having multiple ftp connections to the tivo ms_ftp server. If a transfer fails. Make sure the ms_ftp server is still not connected to the client.
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